Source code for datasets.mod16

""" RHEAS module for retrieving MODIS evapotranspiration data (MOD16 product).

.. module:: mod16
   :synopsis: Retrieve MODIS evapotranspiration data

.. moduleauthor:: Kostas Andreadis <kandread@jpl.nasa.gov>

"""

import modis
import tempfile
from ftplib import FTP
import subprocess
import glob
import shutil
import dbio
import datasets
from datetime import timedelta
import logging


table = "evap.mod16"


[docs]def dates(dbname): dts = datasets.dates(dbname, table) return dts
[docs]def download(dbname, dts, bbox): """Downloads the MODIS evapotranspiration data product MOD16 for a set of dates *dt* and imports them into the PostGIS database *dbname*.""" log = logging.getLogger(__name__) res = 0.01 url = "ftp.ntsg.umt.edu" tiles = modis.findTiles(bbox) if tiles is not None: ftp = FTP(url) ftp.login() for dt in [dts[0] + timedelta(dti) for dti in range((dts[-1] - dts[0]).days + 1)]: try: ftp.cwd( "pub/MODIS/NTSG_Products/MOD16/MOD16A2.105_MERRAGMAO/Y{0}".format(dt.year)) days = ftp.nlst() datadir = "D{0}".format(dt.strftime("%j")) if datadir in days: ftp.cwd(datadir) files = [f for f in ftp.nlst() if any( f.find("h{0:02d}v{1:02d}".format(t[1], t[0])) > 0 for t in tiles)] outpath = tempfile.mkdtemp() for fname in files: with open("{0}/{1}".format(outpath, fname), 'wb') as f: ftp.retrbinary("RETR {0}".format(fname), f.write) proc = subprocess.Popen(["gdal_translate", "HDF4_EOS:EOS_GRID:{0}/{1}:MOD_Grid_MOD16A2:ET_1km".format( outpath, fname), "{0}/{1}".format(outpath, fname).replace("hdf", "tif")], stdout=subprocess.PIPE, stderr=subprocess.STDOUT) out, err = proc.communicate() log.debug(out) tifs = glob.glob("{0}/*.tif".format(outpath)) proc = subprocess.Popen( ["gdal_merge.py", "-o", "{0}/et.tif".format(outpath)] + tifs, stdout=subprocess.PIPE, stderr=subprocess.STDOUT) out, err = proc.communicate() log.debug(out) proc = subprocess.Popen(["gdal_calc.py", "-A", "{0}/et.tif".format(outpath), "--outfile={0}/et1.tif".format( outpath), "--NoDataValue=-9999", "--calc=\"(A<32701)*(0.1*A+9999)-9999\""], stdout=subprocess.PIPE, stderr=subprocess.STDOUT) out, err = proc.communicate() log.debug(out) proc = subprocess.Popen(["gdalwarp", "-t_srs", "'+proj=latlong +ellps=sphere'", "-tr", str( res), str(-res), "{0}/et1.tif".format(outpath), "{0}/et2.tif".format(outpath)], stdout=subprocess.PIPE, stderr=subprocess.STDOUT) out, err = proc.communicate() log.debug(out) if bbox is None: pstr = [] else: pstr = ["-projwin", str(bbox[0]), str(bbox[3]), str(bbox[2]), str(bbox[1])] proc = subprocess.Popen(["gdal_translate"] + pstr + ["-a_srs", "epsg:4326", "{0}/et2.tif".format(outpath), "{0}/et3.tif".format(outpath)], stdout=subprocess.PIPE, stderr=subprocess.STDOUT) out, err = proc.communicate() log.debug(out) dbio.ingest( dbname, "{0}/et3.tif".format(outpath), dt, table, False) shutil.rmtree(outpath) except: log.warning("MOD16 data not available for {0}. Skipping download!".format( dt.strftime("%Y-%m-%d")))
[docs]class Mod16: def __init__(self): """Initialize MOD16 evapotranspiration object.""" self.statevar = ["soil_moist"] self.obsvar = "evap" self.res = 0.01 self.stddev = 1.0 self.tablename = "evap.mod16"